STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REM1GTP-binding protein; Belongs to the small GTPase superfamily. RGK family. (298 aa)    
Predicted Functional Partners:
FRMPD2
FERM and PDZ domain containing 2.
    
 0.855
ITSN2
Intersectin 2.
    
 0.792
A0A4W2ERJ0
EH domain-containing protein.
    
 0.792
A0A4W2FQ17
Uncharacterized protein.
    
 0.792
SNTA1
Syntrophin alpha 1.
      
 0.733
RHO
Rhodopsin.
     
 0.725
ITSN1
Intersectin 1.
    
 0.668
SOS1
SOS Ras/Rac guanine nucleotide exchange factor 1.
    
 0.655
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 0.645
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
   
 0.634
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.