STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL4A1Collagen type IV alpha 1 chain. (1669 aa)    
Predicted Functional Partners:
COL4A2
Collagen type IV alpha 2 chain.
  
0.999
CD44
CD44 molecule (Indian blood group).
   
 0.899
A0A4W2CL25
Uncharacterized protein.
     
 0.898
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 0.886
ITGA5
Integrin subunit alpha 5; Belongs to the integrin alpha chain family.
   
 0.870
ITGA11
Integrin subunit alpha 11; Belongs to the integrin alpha chain family.
   
 
 0.866
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
   
 
 0.864
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
    
 0.862
ITGB4
Integrin beta.
    
 0.860
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
    
 0.857
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.