STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCED1BPC-esterase domain containing 1B. (465 aa)    
Predicted Functional Partners:
A0A4W2F2K6
Ig-like domain-containing protein.
      
 0.577
PDZRN4
PDZ domain containing ring finger 4.
      
 0.473
A0A4W2DGJ7
Ig-like domain-containing protein.
      
 0.471
H2AFY2
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
      
 0.467
STK32B
Serine/threonine kinase 32B; Belongs to the protein kinase superfamily.
      
 0.422
LOC113877294
Myotubularin phosphatase domain-containing protein.
      
 0.420
EXOC6B
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.416
MPZL3
Myelin protein zero like 3.
      
 0.414
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
      
 0.406
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.