STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSTF1Cleavage stimulation factor subunit 1. (431 aa)    
Predicted Functional Partners:
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.997
CSTF2T
Cleavage stimulation factor subunit 2 tau variant.
    
 0.995
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.988
FIP1L1
Fip1 domain-containing protein.
    
 0.951
CPSF4
Cleavage and polyadenylation specific factor 4.
   
 0.948
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 
 0.934
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.929
SYMPK
Symplekin.
     
 0.905
ZC3H3
Zinc finger CCCH-type containing 3.
   
 0.895
YTHDC2
YTH domain containing 2.
   
 
 0.849
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.