STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAI14Retinoic acid induced 14. (1024 aa)    
Predicted Functional Partners:
KIF6
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.711
HOMER2
Homer scaffold protein 2.
    
 0.610
SMAP2
Small ArfGAP2.
    
 
 0.603
CEP170B
Centrosomal protein 170B.
    
 0.535
RHNO1
RAD9-HUS1-RAD1 interacting nuclear orphan 1.
     
 0.517
H2AFJ
Histone H2A; Belongs to the histone H2A family.
    
 0.513
MAPRE2
Microtubule associated protein RP/EB family member 2.
    
 
 0.510
UTP6
UTP6 small subunit processome component.
   
  
 0.502
C2CD5
C2 calcium dependent domain containing 5.
    
 
 0.497
AOPEP
Aminopeptidase O (putative).
    
 
 0.496
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.