STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJA2Praja ring finger ubiquitin ligase 2. (709 aa)    
Predicted Functional Partners:
CREBRF
CREB3 regulatory factor.
     
 0.733
ACBD5
Acyl-CoA binding domain containing 5.
      
 0.723
FBXL17
F-box and leucine rich repeat protein 17.
   
 
 0.708
TBC1D9
TBC1 domain family member 9.
      
 0.687
DNAJC16
DnaJ heat shock protein family (Hsp40) member C16.
   
  
 0.671
ADNP
Activity dependent neuroprotector homeobox.
   
  
 0.635
FKBP3
Peptidylprolyl isomerase.
   
 
 0.600
UBE2K
Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.600
HUS1
Checkpoint protein; Belongs to the HUS1 family.
      
 0.577
RSPO1
R-spondin 1.
   
 0.546
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.