STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM120BFamily with sequence similarity 120B. (731 aa)    
Predicted Functional Partners:
PDCD2
Programmed cell death 2.
      
 0.772
PSMB1
Proteasome subunit beta.
     
 0.725
ADGRD2
Adhesion G protein-coupled receptor D2; Belongs to the G-protein coupled receptor 2 family.
      
 0.701
PALB2
Partner and localizer of BRCA2.
    
 0.595
NSMCE1
NSE1 homolog, SMC5-SMC6 complex component.
      
 0.576
PSMB7
Proteasome subunit beta.
      
 0.559
A0A4W2DNY5
Uncharacterized protein.
      
 0.559
ARID4B
AT-rich interaction domain 4B.
    
 0.557
FANCM
FA complementation group M.
    
 0.534
DUSP28
Dual specificity phosphatase 28.
      
 0.493
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.