STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFC3H1Zinc finger C3H1-type containing. (1953 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
    
 0.949
PNISR
PNN interacting serine and arginine rich protein.
   
    0.883
SF3B1
Splicing factor 3b subunit 1.
   
    0.825
SKIV2L
Ski2 like RNA helicase.
    
 
 0.821
TTC14
Tetratricopeptide repeat domain 14.
   
   0.803
RNPC3
RNA binding region (RNP1, RRM) containing 3.
   
 
 0.785
ZNF638
Zinc finger protein 638.
   
   0.774
NKTR
Natural killer cell triggering receptor.
   
    0.771
PGM2
Phosphoglucomutase 2.
   
    0.771
ACOT11
Acyl-CoA thioesterase 11.
   
    0.771
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.