STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGEFNeuronal guanine nucleotide exchange factor. (667 aa)    
Predicted Functional Partners:
EPHA4
EPH receptor A4.
    
 0.942
EPHA1
EPH receptor A1.
    
 0.927
RHOA
Ras homolog family member A.
    
 0.921
CDC42
Cell division cycle 42.
    
 0.916
EPHA2
EPH receptor A2.
    
 0.909
EPHB2
EPH receptor B2.
    
 0.906
EPHB1
EPH receptor B1.
    
 0.903
EPHA7
EPH receptor A7.
    
 0.902
EPHA5
EPH receptor A5.
    
 0.902
EPHA6
EPH receptor A6.
    
 0.902
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.