STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFXANKRegulatory factor X associated ankyrin containing protein. (271 aa)    
Predicted Functional Partners:
RFX5
Regulatory factor X5.
   
 0.997
RFXAP
Regulatory factor X associated protein.
    
 0.989
CIITA
Class II major histocompatibility complex transactivator.
   
 0.933
RFX7
Regulatory factor X7.
    
 0.898
A0A4W2EVH5
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
   
 0.642
TMEM69
Transmembrane protein 69.
      
 0.630
CIB3
Calcium and integrin binding family member 3.
    
 0.617
NR2C2AP
Nuclear receptor 2C2 associated protein.
    
 0.607
RFX1
Regulatory factor X1.
   
 0.602
CAMKMT
Calmodulin-lysine N-methyltransferase.
    
 
 0.600
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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