STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAP1GAPRAP1 GTPase activating protein. (1040 aa)    
Predicted Functional Partners:
RAP1B
Uncharacterized protein.
    
 0.972
RAP1A
RAP1A, member of RAS oncogene family.
    
 0.952
RAPGEF4
Rap guanine nucleotide exchange factor 4.
   
 0.667
RAPGEF3
Rap guanine nucleotide exchange factor 3.
   
 0.648
RALB
RAS like proto-oncogene B.
    
 0.634
LOC113879739
Uncharacterized protein.
    
 0.569
RAP2A
Uncharacterized protein.
    
 0.569
RAP2B
RAP2B, member of RAS oncogene family.
    
 0.569
RAPGEF5
Rap guanine nucleotide exchange factor 5.
   
 0.534
GFRA2
GDNF family receptor alpha 2.
   
 
 0.526
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.