STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDGFHeparin binding growth factor. (249 aa)    
Predicted Functional Partners:
PTN
Pleiotrophin.
   
  
 0.615
A0A4W2EKV2
Uncharacterized protein.
      
 0.588
A0A4W2ED12
Uncharacterized protein.
      
 0.579
GOT2
Aspartate aminotransferase.
   
    0.574
CDK13
Cyclin dependent kinase 13.
    
 
 0.533
CDK12
Cyclin dependent kinase 12.
    
 
 0.533
CDYL
Chromodomain Y like.
   
 
 0.521
FGF2
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.471
SMYD1
SET and MYND domain containing 1.
   
 
 0.468
GAPT
GRB2 binding adaptor protein, transmembrane.
      
 0.467
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.