STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4W2F112Erf4 domain-containing protein. (165 aa)    
Predicted Functional Partners:
PAFAH2
Platelet-activating factor acetylhydrolase.
      
 0.578
MPZL3
Myelin protein zero like 3.
      
 0.499
FIP1L1
Fip1 domain-containing protein.
      
 0.497
RIOK3
Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses.
      
 0.495
ACSS3
Acyl-CoA synthetase short chain family member 3.
      
 0.489
LRRC8C
Leucine rich repeat containing 8 VRAC subunit C.
      
 0.487
ARL9
ADP ribosylation factor like GTPase 9.
      
 0.485
SLC10A1
Solute carrier family 10 member 1.
      
 0.483
VAMP5
Vesicle associated membrane protein 5.
      
 0.483
TMEM176B
Transmembrane protein 176B.
      
 0.479
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.