STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAVER1Uncharacterized protein. (758 aa)    
Predicted Functional Partners:
VCL
Vinculin.
    
 
 0.912
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
    0.780
EFHB
EF-hand domain family member B.
   
  
 0.744
RCE1
Ras converting CAAX endopeptidase 1.
      
 0.718
DUSP27
Dual specificity phosphatase 27, atypical; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.699
SCLY
Selenocysteine lyase.
      
 0.694
TMC6
Transmembrane channel-like protein.
    
 
 0.690
MRVI1
Murine retrovirus integration site 1 homolog.
      
 0.684
ZNF331
Zinc finger protein 331.
      
 0.682
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.653
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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