STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NTNG1Netrin G1. (582 aa)    
Predicted Functional Partners:
LRRC4C
Leucine rich repeat containing 4C.
   
 0.989
LRRC4B
Leucine rich repeat containing 4B.
   
 0.860
VASN
Vasorin.
   
 0.809
LRRC4
Leucine rich repeat containing 4.
   
 0.755
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.752
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3; Belongs to the G-protein coupled receptor 1 family.
    
 0.752
PIDD1
P53-induced death domain protein 1.
    
 0.696
LRRTM1
Leucine rich repeat transmembrane neuronal 1.
   
 0.686
LRFN4
Leucine rich repeat and fibronectin type III domain containing 4.
    
 0.685
CHAD
Chondroadherin.
    
 0.677
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.