Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDNF | GDNF | A0A4W2GUU1 | A0A4W2FAL1 | Cerebral dopamine neurotrophic factor. | Glial cell derived neurotrophic factor. | 0.593 |
CDNF | NGF | A0A4W2GUU1 | A0A4W2ETE2 | Cerebral dopamine neurotrophic factor. | Nerve growth factor; Belongs to the NGF-beta family. | 0.406 |
CDNF | NRTN | A0A4W2GUU1 | A0A4W2FQC1 | Cerebral dopamine neurotrophic factor. | Neurturin. | 0.756 |
CDNF | PSPN | A0A4W2GUU1 | A0A4W2HMM2 | Cerebral dopamine neurotrophic factor. | Persephin. | 0.680 |
GDNF | CDNF | A0A4W2FAL1 | A0A4W2GUU1 | Glial cell derived neurotrophic factor. | Cerebral dopamine neurotrophic factor. | 0.593 |
GDNF | GFRA1 | A0A4W2FAL1 | A0A4W2BWW0 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha 1. | 0.978 |
GDNF | GFRA2 | A0A4W2FAL1 | A0A4W2DE67 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha 2. | 0.933 |
GDNF | GFRA3 | A0A4W2FAL1 | A0A4W2FQP6 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha 3. | 0.837 |
GDNF | GFRAL | A0A4W2FAL1 | A0A4W2BXG7 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha like. | 0.841 |
GDNF | NGF | A0A4W2FAL1 | A0A4W2ETE2 | Glial cell derived neurotrophic factor. | Nerve growth factor; Belongs to the NGF-beta family. | 0.724 |
GDNF | NRTN | A0A4W2FAL1 | A0A4W2FQC1 | Glial cell derived neurotrophic factor. | Neurturin. | 0.689 |
GDNF | PSPN | A0A4W2FAL1 | A0A4W2HMM2 | Glial cell derived neurotrophic factor. | Persephin. | 0.541 |
GDNF | RET | A0A4W2FAL1 | A0A4W2C1A7 | Glial cell derived neurotrophic factor. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.913 |
GDNF | SRC | A0A4W2FAL1 | A0A4W2FMT6 | Glial cell derived neurotrophic factor. | Tyrosine-protein kinase. | 0.548 |
GFRA1 | GDNF | A0A4W2BWW0 | A0A4W2FAL1 | GDNF family receptor alpha 1. | Glial cell derived neurotrophic factor. | 0.978 |
GFRA1 | NRTN | A0A4W2BWW0 | A0A4W2FQC1 | GDNF family receptor alpha 1. | Neurturin. | 0.744 |
GFRA1 | PSPN | A0A4W2BWW0 | A0A4W2HMM2 | GDNF family receptor alpha 1. | Persephin. | 0.554 |
GFRA1 | RET | A0A4W2BWW0 | A0A4W2C1A7 | GDNF family receptor alpha 1. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.992 |
GFRA2 | GDNF | A0A4W2DE67 | A0A4W2FAL1 | GDNF family receptor alpha 2. | Glial cell derived neurotrophic factor. | 0.933 |
GFRA2 | NGF | A0A4W2DE67 | A0A4W2ETE2 | GDNF family receptor alpha 2. | Nerve growth factor; Belongs to the NGF-beta family. | 0.485 |
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