STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YDJCYdjC chitooligosaccharide deacetylase homolog. (393 aa)    
Predicted Functional Partners:
CDC16
Cell division cycle 16.
    
 
 0.584
PLEKHM3
Pleckstrin homology domain containing M3.
      
 0.487
DCAF1
DDB1 and CUL4 associated factor 1.
      
 0.468
A0A4W2C190
Epithelial membrane protein 2; Functions as a key regulator of cell membrane composition by regulating proteins surface expression. Also, plays a role in regulation of processes including cell migration, cell proliferation, cell contraction and cell adhesion; Belongs to the PMP-22/EMP/MP20 family.
      
 0.465
A0A4W2BKJ3
Uncharacterized protein.
   
 
 0.429
A0A4W2BKK7
Uncharacterized protein.
   
 
 0.429
A0A4W2BNN7
Uncharacterized protein.
   
 
 0.429
KL
Klotho.
   
 
 0.429
A0A4W2C5A4
Uncharacterized protein.
   
 
 0.429
A0A4W2CMR9
Uncharacterized protein.
   
 
 0.429
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.