STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STMN2Stathmin; Belongs to the stathmin family. (179 aa)    
Predicted Functional Partners:
GAP43
Growth associated protein 43.
   
  
 0.661
RTN1
Reticulon.
   
 
 0.556
STAT3
Signal transducer and activator of transcription.
   
 0.555
S100B
Protein S100; Belongs to the S-100 family.
   
 0.530
LRFN2
Leucine rich repeat and fibronectin type III domain containing 2.
    
 0.524
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.500
RARB
Retinoic acid receptor beta.
      
 0.497
ELAVL3
ELAV-like protein; Belongs to the RRM elav family.
   
  
 0.491
RND1
Rho family GTPase 1.
   
 0.487
UBE2C
Ubiquitin conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.475
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.