STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4W2GDH5Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (319 aa)    
Predicted Functional Partners:
H2AFV
Histone H2A; Belongs to the histone H2A family.
   
 
 0.503
LOC113894093
Histone H2A; Belongs to the histone H2A family.
   
 
 0.503
A0A4W2H495
Histone H2A; Belongs to the histone H2A family.
   
 
 0.503
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 
 0.478
SDAD1
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
    
 
 0.472
A0A4W2D7S8
Uncharacterized protein.
   
 
 0.438
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.438
A0A4W2ETA9
Uncharacterized protein.
   
 
 0.438
IPO9
Importin 9.
   
 
 0.427
SHISA4
Shisa family member 4.
   
 
 0.427
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.