STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMP3Epithelial membrane protein 3; Probably involved in cell proliferation and cell-cell interactions; Belongs to the PMP-22/EMP/MP20 family. (163 aa)    
Predicted Functional Partners:
LGALS1
Galectin.
   
  
 0.700
S100A4
EF-hand domain-containing protein.
   
  
 0.675
A0A4W2ECB7
FXYD domain-containing ion transport regulator; Belongs to the FXYD family.
   
    0.652
CHRNB1
Cholinergic receptor nicotinic beta 1 subunit.
      
 0.577
PITPNC1
Phosphatidylinositol transfer protein cytoplasmic 1.
      
 0.576
GNB5
G protein subunit beta 5.
      
 0.573
MAN1A2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.499
TMEM143
Transmembrane protein 143.
      
 0.497
FAM83E
Family with sequence similarity 83 member E.
  
   
 0.495
EFEMP2
EGF containing fibulin extracellular matrix protein 2.
   
  
 0.492
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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