STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NKX2-8NK2 homeobox 8. (237 aa)    
Predicted Functional Partners:
GJA5
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.491
CHP2
Calcineurin like EF-hand protein 2.
      
 0.467
SHOX
Short stature homeobox.
    
 
 0.422
THAP1
THAP domain containing 1.
      
 0.422
SHOX2
Short stature homeobox 2.
    
 
 0.422
ZNF300
Zinc finger protein 300.
      
 0.420
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
      
 0.420
ZBTB7B
Zinc finger and BTB domain containing 7B.
      
 0.418
ZNF202
Zinc finger protein 202.
      
 0.416
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.