STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMO4LIM domain only 4. (165 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
   
 0.728
LDB2
LIM domain binding 2.
   
 0.577
IDI1
Isopentenyl-diphosphate delta isomerase 1.
    
   0.520
NOX3
NADPH oxidase 3.
      
 0.470
A0A4W2CJR9
Uncharacterized protein.
    
 
 0.438
A0A4W2CJU3
Uncharacterized protein.
    
 
 0.438
HMX2
H6 family homeobox 2.
    
 
 0.437
MYO7A
Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.422
KLK10
Kallikrein related peptidase 10; Belongs to the peptidase S1 family.
      
 0.420
SH2D4B
SH2 domain containing 4B.
      
 0.420
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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