STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFP82ZFP82 zinc finger protein. (530 aa)    
Predicted Functional Partners:
PLPP4
Phospholipid phosphatase 4.
    
 0.520
LRRC3B
Leucine rich repeat containing 3B.
    
 
 0.510
GPR149
G protein-coupled receptor 149.
   
 
 0.478
HECW1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1.
    
 0.475
DTHD1
Death domain containing 1.
      
 0.472
CCDC24
Uncharacterized protein.
      
 0.469
HS3ST6
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.465
CCDC136
Coiled-coil domain containing 136.
    
 0.462
COPRS
Coordinator of PRMT5 and differentiation stimulator.
      
 0.459
FIBCD1
Fibrinogen C domain containing 1.
    
 0.440
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.