STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABL3RAB, member of RAS oncogene family like 3. (236 aa)    
Predicted Functional Partners:
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
      
 0.769
RAB3IP
Sec2p domain-containing protein.
      
 0.756
RABGEF1
Uncharacterized protein.
   
 
 0.736
GTF2E1
General transcription factor IIE subunit 1.
   
  
 0.735
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
      
 0.723
RAB24
RAB24, member RAS oncogene family.
   
  
 0.706
RABL6
RAB, member RAS oncogene family like 6.
      
 0.693
RAB3B
RAB3B, member RAS oncogene family.
     
 0.637
RAB39A
RAB39A, member RAS oncogene family.
   
0.627
SPATA5
Spermatogenesis associated 5.
   
 0.602
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.