STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRAReceptor-type tyrosine-protein phosphatase alpha. (813 aa)    
Predicted Functional Partners:
GRB2
Growth factor receptor bound protein 2.
   
 0.902
ZFP37
ZFP37 zinc finger protein.
      
 0.828
RFTN1
Raftlin, lipid raft linker 1.
      
 0.742
DOCK2
Dedicator of cytokinesis 2; Belongs to the DOCK family.
   
  
 0.740
PCED1A
PC-esterase domain containing 1A.
      
 0.723
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.611
RNF24
Ring finger protein 24.
   
 
 0.585
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
    
 0.583
FLRT3
Fibronectin leucine rich transmembrane protein 3.
    
 0.570
CNTN5
Contactin 5.
    
 0.566
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.