STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBLN4Cerebellin 4 precursor. (201 aa)    
Predicted Functional Partners:
STRC
Stereocilin.
      
 0.572
LAMP5
Lysosomal associated membrane protein family member 5.
   
  
 0.508
RFX8
RFX family member 8, lacking RFX DNA binding domain.
      
 0.499
PARM1
Prostate androgen-regulated mucin-like protein 1.
      
 0.497
IGDCC3
Immunoglobulin superfamily DCC subclass member 3.
   
 
 0.496
LGI2
Leucine rich repeat LGI family member 2.
      
 0.493
OTOG
Otogelin.
      
 0.489
TECTA
Tectorin alpha.
      
 0.480
ZMYM3
Zinc finger MYM-type containing 3.
      
 0.471
NDNF
Neuron derived neurotrophic factor.
      
 0.469
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.