STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CELF1CUGBP Elav-like family member 1. (514 aa)    
Predicted Functional Partners:
A0A4W2CGW0
Uncharacterized protein.
   
 
 0.799
A0A4W2DRN1
RRM domain-containing protein.
   
 
 0.799
HNRNPC
RRM domain-containing protein.
   
 
 0.799
DMPK
DM1 protein kinase.
    
 
 0.782
MBNL1
Muscleblind like splicing regulator 1.
   
 
 0.730
CLCN1
Chloride channel protein.
      
 0.723
RALY
RALY heterogeneous nuclear ribonucleoprotein.
    
 
 0.721
RALYL
RALY RNA binding protein like.
    
 
 0.717
MBNL2
Muscleblind like splicing regulator 2.
   
 
 0.622
SSX2IP
SSX family member 2 interacting protein.
   
 
 0.596
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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