STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIMP4TIMP metallopeptidase inhibitor 4. (224 aa)    
Predicted Functional Partners:
MMP9
Matrix metallopeptidase 9.
    
 0.709
MMP8
Matrix metallopeptidase 8.
    
 0.690
MMP3
Matrix metallopeptidase 3.
    
 0.619
MMP12
Matrix metallopeptidase 12.
    
 0.615
MMP14
Matrix metallopeptidase 14.
    
 0.602
MMP7
Matrix metallopeptidase 7.
    
 0.601
MMP13
Matrix metallopeptidase 13.
    
 0.564
MMP16
Matrix metallopeptidase 16.
    
 0.548
MMP2
Matrix metallopeptidase 2.
    
 0.548
MMP24
Matrix metallopeptidase 24.
    
 0.530
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.