STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF1B2Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family. (225 aa)    
Predicted Functional Partners:
A0A4W2CXB1
Uncharacterized protein.
   
 0.999
EEF1D
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
  
0.986
VARS
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.961
TPT1
Tumor protein, translationally-controlled 1; Belongs to the TCTP family.
  
 
 0.909
A0A4W2C8D7
TCTP domain-containing protein; Belongs to the TCTP family.
  
 
 0.883
RPS18
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.874
A0A4W2H834
Uncharacterized protein.
   
 
 0.874
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.874
RPLP0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 
 0.872
RPS9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.870
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.