Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NRLNeural retina leucine zipper. (139 aa)    
Predicted Functional Partners:
GUCA1B
Guanylate cyclase activator 1B.
   
  
 0.996
ENSVPAP00000003509
annotation not available
    
 
 0.883
RHO
Rhodopsin.
   
 
 0.854
ENSVPAP00000011547
annotation not available
    
 0.795
NFE2L2
Nuclear factor, erythroid 2 like 2.
    
 0.761
NFE2L1
Nuclear factor, erythroid 2 like 1.
    
 0.761
NFE2L3
Nuclear factor, erythroid 2 like 3.
    
 0.761
NR2E1
Nuclear receptor subfamily 2 group E member 1.
   
 
 0.729
OPN1SW
Opsin 1, short wave sensitive.
      
 0.684
FST
Follistatin.
      
 0.665
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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