Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZSCAN26Zinc finger and SCAN domain containing 26. (309 aa)    
Predicted Functional Partners:
PCF11
PCF11 cleavage and polyadenylation factor subunit.
     
 0.739
ENSVPAP00000003867
annotation not available
      
 0.677
ARRDC3
Arrestin domain containing 3.
    
 
 0.619
ENSVPAP00000003396
annotation not available
    
 0.582
MXI1
MAX interactor 1, dimerization protein.
    
 
 0.556
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.530
JADE1
Jade family PHD finger 1.
      
 0.524
SNX10
Sorting nexin 10.
      
 0.521
ENSVPAP00000003920
annotation not available
    
 0.512
CHD1
Chromodomain helicase DNA binding protein 1.
    
 0.511
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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