Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C11orf1Chromosome 11 open reading frame 1. (136 aa)    
Predicted Functional Partners:
FAM183A
Family with sequence similarity 183 member A.
    
 
 0.968
ENSVPAP00000001652
annotation not available
   
 
 0.965
CFAP126
Cilia and flagella associated protein 126.
    
 
 0.953
ENSVPAP00000000769
annotation not available
    
   0.946
TEX43
Testis expressed 43.
   
   0.910
ENSVPAP00000002060
annotation not available
    
   0.909
EFHB
EF-hand domain family member B.
   
   0.908
CCDC173
Coiled-coil domain containing 173.
   
   0.897
C7orf31
Chromosome 7 open reading frame 31.
   
   0.897
C9orf135
Chromosome 9 open reading frame 135.
   
   0.896
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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