Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DUSP27Dual specificity phosphatase 27, atypical. (1158 aa)    
Predicted Functional Partners:
EFHB
EF-hand domain family member B.
    
 
 0.762
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
      
 0.740
DUSP11
Dual specificity phosphatase 11.
      
 0.692
MRVI1
Murine retrovirus integration site 1 homolog.
    
 
 0.614
ENSVPAP00000004976
annotation not available
      
 0.613
TTI2
TELO2 interacting protein 2.
      
 0.601
LRFN4
Leucine rich repeat and fibronectin type III domain containing 4.
    
 
 0.576
MAPK7
Mitogen-activated protein kinase 7.
    
 0.569
MAPK6
Mitogen-activated protein kinase 6.
    
 0.569
MAPK14
Mitogen-activated protein kinase 14.
    
 0.569
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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