Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POU2F1POU class 2 homeobox 1. (755 aa)    
Predicted Functional Partners:
ENSVPAP00000011293
annotation not available
    
 0.989
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
    
 0.974
NR3C1
Nuclear receptor subfamily 3 group C member 1.
   
 0.971
ENSVPAP00000009559
annotation not available
   
 
 0.968
XRCC5
X-ray repair cross complementing 5.
    
   0.964
BRCA1
BRCA1 DNA repair associated.
    
 
 0.964
XRCC6
X-ray repair cross complementing 6.
    
   0.964
SNAPC5
Small nuclear RNA activating complex polypeptide 5.
    
  0.957
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
    
  0.954
C11orf53
Chromosome 11 open reading frame 53.
    
 
 0.937
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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