Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM67Transmembrane protein 67. (996 aa)    
Predicted Functional Partners:
TMEM216
Transmembrane protein 216.
   
 
 0.993
MKS1
MKS transition zone complex subunit 1.
     
 0.992
AHI1
Abelson helper integration site 1.
     
 0.987
TCTN1
Tectonic family member 1.
     
 0.980
TCTN2
Tectonic family member 2.
    
 0.955
CC2D2A
Coiled-coil and C2 domain containing 2A.
   
 
 0.952
TCTN3
Tectonic family member 3.
     
 0.915
RPGRIP1L
RPGRIP1 like.
   
  
 0.912
TMEM231
Transmembrane protein 231.
   
  
 0.878
TMEM237
Transmembrane protein 237.
   
  
 0.850
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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