Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCTD19Potassium channel tetramerization domain containing 19. (883 aa)    
Predicted Functional Partners:
WDR12
WD repeat domain 12.
   
 0.979
NOP58
NOP58 ribonucleoprotein.
  
 
 0.973
ENSVPAP00000008967
annotation not available
  
 0.971
EBNA1BP2
EBNA1 binding protein 2.
   
 0.963
RPF2
Ribosome production factor 2 homolog.
   
 
 0.961
GNL2
G protein nucleolar 2.
  
 0.960
PUM3
Pumilio RNA binding family member 3.
   
 
 0.959
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.958
GNL3L
G protein nucleolar 3 like.
  
 0.957
ENSVPAP00000006861
annotation not available
  
 0.957
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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