Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DUSP11Dual specificity phosphatase 11. (332 aa)    
Predicted Functional Partners:
POLR2C
RNA polymerase II subunit C.
   
 0.922
POLR2G
RNA polymerase II subunit G.
    
  0.908
POLR2D
RNA polymerase II subunit D.
    
 0.905
XRN1
5'-3' exoribonuclease 1.
   
 
 0.893
B3GAT1
Beta-1,3-glucuronyltransferase 1.
      
 0.888
EIF5B
Eukaryotic translation initiation factor 5B.
    
 
 0.856
ENSVPAP00000006584
annotation not available
    
  0.821
ENSVPAP00000001462
annotation not available
     
 0.814
GPS2
G protein pathway suppressor 2.
    
 0.813
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
    
   0.805
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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