Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001032annotation not available (225 aa)    
Predicted Functional Partners:
SCAMP3
Secretory carrier membrane protein 3.
  
   0.972
SCAMP1
Secretory carrier membrane protein 1.
    
   0.951
SLC25A30
Solute carrier family 25 member 30.
      
 0.716
HDDC3
HD domain containing 3.
      
 0.716
ARHGEF3
Rho guanine nucleotide exchange factor 3.
    
 
 0.683
SLC25A14
Solute carrier family 25 member 14.
      
 0.609
ENSVPAP00000009095
annotation not available
      
 0.591
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 
 0.571
ITM2B
Integral membrane protein 2B.
    
 
 0.546
ENSVPAP00000001202
annotation not available
      
 0.506
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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