Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NDUFS4NADH:ubiquinone oxidoreductase subunit S4. (141 aa)    
Predicted Functional Partners:
NDUFS1
NADH:ubiquinone oxidoreductase core subunit S1.
   
 0.999
ENSVPAP00000002243
annotation not available
   
 0.999
NDUFA2
NADH:ubiquinone oxidoreductase subunit A2.
   
 0.999
NDUFB4
NADH:ubiquinone oxidoreductase subunit B4.
   
 0.999
NDUFB11
NADH:ubiquinone oxidoreductase subunit B11.
   
 0.999
NDUFS3
NADH:ubiquinone oxidoreductase core subunit S3.
   
 0.999
ENSVPAP00000005782
annotation not available
   
 0.999
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
   
 0.999
NDUFB9
NADH:ubiquinone oxidoreductase subunit B9.
   
 0.999
NDUFB5
NADH:ubiquinone oxidoreductase subunit B5.
   
 0.999
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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