Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXA3Forkhead box A3. (349 aa)    
Predicted Functional Partners:
ENSVPAP00000010623
annotation not available
      
 0.835
TRPS1
Transcriptional repressor GATA binding 1.
    
 0.829
FOXA1
Forkhead box A1.
   
 
 0.793
HNF1B
HNF1 homeobox B.
     
 0.724
ENSVPAP00000009228
annotation not available
   
 
 0.637
CLCA1
Chloride channel accessory 1.
      
 0.596
SEPTIN7
Septin 7.
      
 0.585
ENSVPAP00000004183
annotation not available
    
 0.571
TLE1
TLE family member 1, transcriptional corepressor.
    
 0.559
TLE4
TLE family member 4, transcriptional corepressor.
    
 0.559
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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