Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF704Zinc finger protein 704. (416 aa)    
Predicted Functional Partners:
ING2
Inhibitor of growth family member 2.
   
   0.966
SAP30
Sin3A associated protein 30.
    
 
 0.964
ENSVPAP00000008467
annotation not available
    
   0.929
BRMS1L
BRMS1 like transcriptional repressor.
    
   0.929
ARID4B
AT-rich interaction domain 4B.
    
 
 0.854
SIN3A
SIN3 transcription regulator family member A.
    
   0.827
ENSVPAP00000008263
annotation not available
    
   0.827
FBXW11
F-box and WD repeat domain containing 11.
    
   0.779
MDN1
Midasin AAA ATPase 1.
    
 
 0.740
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
   0.732
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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