Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001064annotation not available (163 aa)    
Predicted Functional Partners:
RBFOX2
RNA binding fox-1 homolog 2.
    
   0.854
TEX37
Testis expressed 37.
    
   0.786
RPS27A
Ribosomal protein S27a.
    
   0.783
REEP1
Receptor accessory protein 1.
    
   0.759
BOLL
Boule homolog, RNA binding protein.
    
 
 0.641
SMAP2
Small ArfGAP2.
    
   0.638
RNF115
Ring finger protein 115.
    
   0.627
ZFAND1
Zinc finger AN1-type containing 1.
    
   0.618
ENSVPAP00000006523
annotation not available
      
 0.610
RBFOX1
RNA binding fox-1 homolog 1.
    
   0.582
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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