Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOOK3Hook microtubule tethering protein 3. (628 aa)    
Predicted Functional Partners:
ENSVPAP00000010096
annotation not available
    
 
 0.990
AKTIP
AKT interacting protein.
    
 
 0.982
HOOK1
Hook microtubule tethering protein 1.
    
   0.965
KIF1B
Kinesin family member 1B.
   
 
 0.953
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
    
 
 0.951
BICD1
BICD cargo adaptor 1.
   
 
 0.949
FAM160B1
Family with sequence similarity 160 member B1.
    
 
 0.925
ENSVPAP00000011213
annotation not available
    
 
 0.888
DYNC1LI2
Dynein cytoplasmic 1 light intermediate chain 2.
    
 
 0.838
TNFSF13B
TNF superfamily member 13b.
    
  0.834
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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