Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001071annotation not available (504 aa)    
Predicted Functional Partners:
ATP11C
ATPase phospholipid transporting 11C.
      
 0.720
MTMR9
Myotubularin related protein 9.
      
 0.692
TMEM68
Transmembrane protein 68.
      
 0.689
CTSC
Cathepsin C.
      
 0.676
ENSVPAP00000001764
annotation not available
      
 0.665
CHCHD7
Coiled-coil-helix-coiled-coil-helix domain containing 7.
      
 0.662
CASP9
Caspase 9.
    
 
 0.633
ENSVPAP00000000630
annotation not available
      
 0.620
ENSVPAP00000011245
annotation not available
      
 0.610
ENSVPAP00000011636
annotation not available
      
 0.610
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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