Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R10Protein phosphatase 1 regulatory subunit 10. (564 aa)    
Predicted Functional Partners:
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
    
 0.988
WDR82
WD repeat domain 82.
   
 0.933
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 0.931
TOX4
TOX high mobility group box family member 4.
    
 0.914
ENSVPAP00000003780
annotation not available
      
 0.866
TERF2
Telomeric repeat binding factor 2.
    
 
 0.775
ENSVPAP00000003847
annotation not available
    
 
 0.756
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.704
RUNX2
RUNX family transcription factor 2.
    
 0.700
TOX3
TOX high mobility group box family member 3.
    
 0.692
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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