Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYCE3Synaptonemal complex central element protein 3. (86 aa)    
Predicted Functional Partners:
ENSVPAP00000001337
annotation not available
    
 0.993
ENSVPAP00000005723
annotation not available
    
 0.987
SYCP1
Synaptonemal complex protein 1.
    
 0.981
SYCP3
Synaptonemal complex protein 3.
    
 0.915
SYCP2
Synaptonemal complex protein 2.
    
 0.907
STAG3
Stromal antigen 3.
     
 0.840
CENPE
Centromere protein E.
    
   0.779
SMC3
Structural maintenance of chromosomes 3.
     
 0.777
HORMAD1
HORMA domain containing 1.
      
 0.741
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.713
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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