Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001093annotation not available (615 aa)    
Predicted Functional Partners:
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.992
CDC40
Cell division cycle 40.
   
 0.991
PPIL4
Peptidylprolyl isomerase like 4.
   
 0.990
CWC27
CWC27 spliceosome associated cyclophilin.
   
 0.988
ENSVPAP00000004197
annotation not available
    
 0.985
SF3B2
Splicing factor 3b subunit 2.
   
 0.982
ENSVPAP00000011570
annotation not available
   
 0.980
BUD13
BUD13 homolog.
   
 0.974
SF3B3
Splicing factor 3b subunit 3.
   
 0.959
SF3A3
Splicing factor 3a subunit 3.
   
 0.958
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.