Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000001104annotation not available (453 aa)    
Predicted Functional Partners:
E2F6
E2F transcription factor 6.
    
 0.999
PCGF6
Polycomb group ring finger 6.
    
 0.999
CBX3
Chromobox 3.
    
 0.998
RNF2
Ring finger protein 2.
    
 0.994
MAX
MYC associated factor X.
    
 0.986
TFDP2
Transcription factor Dp-2.
   
 0.981
RYBP
RING1 and YY1 binding protein.
    
 0.981
YAF2
YY1 associated factor 2.
    
 0.981
WDR5B
WD repeat domain 5B.
    
 
 0.966
MGA
MAX dimerization protein MGA.
   
 0.962
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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