Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITM2AIntegral membrane protein 2A. (263 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
   
 0.700
ADNP2
ADNP homeobox 2.
      
 0.613
SLC35A3
Solute carrier family 35 member A3.
      
 0.606
ENSVPAP00000008874
annotation not available
      
 0.587
PLP1
Proteolipid protein 1.
    
 
 0.554
VAMP7
Vesicle associated membrane protein 7.
      
 0.517
GHITM
Growth hormone inducible transmembrane protein.
      
 0.516
ENSVPAP00000002508
annotation not available
   
 
 0.496
RAB14
RAB14, member RAS oncogene family.
   
 
 0.490
ENSVPAP00000010021
annotation not available
   
 
 0.479
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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