Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PGK1Phosphoglycerate kinase 1. (371 aa)    
Predicted Functional Partners:
ENO1
Enolase 1.
  
 0.992
ENSVPAP00000004584
annotation not available
  
 0.980
BPGM
Bisphosphoglycerate mutase.
  
 0.975
ENO4
Enolase 4.
  
 0.969
ENSVPAP00000002535
annotation not available
  
 
 0.965
ENSVPAP00000000908
annotation not available
  
 0.943
PARP8
poly(ADP-ribose) polymerase family member 8.
  
 0.943
CSTF3
Cleavage stimulation factor subunit 3.
  
 
 0.925
ENSVPAP00000003969
annotation not available
  
 0.923
ENSVPAP00000001633
annotation not available
  
 0.917
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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